scirpy.ir\_dist.metrics.TCRdistDistanceCalculator
=================================================

.. currentmodule:: scirpy.ir_dist.metrics

.. add toctree option to make autodoc generate the pages

.. autoclass:: TCRdistDistanceCalculator



Attributes table
~~~~~~~~~~~~~~~~

.. autosummary::

    ~TCRdistDistanceCalculator.blosum62_substitution_matrix
    ~TCRdistDistanceCalculator.matrix_alphabet
    ~TCRdistDistanceCalculator.parasail_aa_alphabet
    ~TCRdistDistanceCalculator.parasail_aa_alphabet_with_unknown
    ~TCRdistDistanceCalculator.tcrblosum_alpha_substitution_matrix
    ~TCRdistDistanceCalculator.tcrblosum_beta_substitution_matrix





Methods table
~~~~~~~~~~~~~

.. autosummary::

    ~TCRdistDistanceCalculator.calc_dist_mat





Attributes
~~~~~~~~~~~



.. autoattribute:: TCRdistDistanceCalculator.blosum62_substitution_matrix
.. autoattribute:: TCRdistDistanceCalculator.matrix_alphabet
.. autoattribute:: TCRdistDistanceCalculator.parasail_aa_alphabet
.. autoattribute:: TCRdistDistanceCalculator.parasail_aa_alphabet_with_unknown
.. autoattribute:: TCRdistDistanceCalculator.tcrblosum_alpha_substitution_matrix
.. autoattribute:: TCRdistDistanceCalculator.tcrblosum_beta_substitution_matrix







Methods
~~~~~~~



.. automethod:: TCRdistDistanceCalculator.calc_dist_mat